Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857307.1_cds_XP_016513398.1_25946
CDS Infomation

[gene=LOC107830377] [db_xref=GeneID:107830377] [protein=ribonuclease III domain-containing protein RNC1, chloroplastic-like isoform X1] [protein_id=XP_016513398.1] [location=join(30372..31147,32272..32476,33506..33706,34199..34285,36279..36596)] [gbkey=CDS]
Sequence

ATGGCCATGGAGTTGTGTTCAACTTTCAAACCCAACTCATTTGATCTCTCCTTTTCATCC
TCATTTTCACACTTTTCTCTCCAAACCCATGTAAAAAGTTTCAAACTTGCACCAAAAATT
CATGTTCTAGCAGTTGCAGTAGACCCAAAAGAGCTCCCTCAAAATAGTCCACAAAGACTC
CTCAAAGAATTAGCAGAGCGTAAAAAAGTAGTATCCCCTAAAAGAAAAGTACCCCCAAAA
AGATTTATCCTAAAACCCCCTTTAGATGATGCTAAGTTAGCTGAAAGATTCCTTAATAGT
CCACAATTGTCTTTAAAATCATTCCCTTTATTGAGTTCTTGTTTACCTTGTTCAAGACTC
AATAATGCTGATAAATCTTGGATTGATGAGTATTTGCTTGAGGTTAAACAAGCTTTAGGG
TACCCTTTAGAGCCATCTGAAAGTTTTGGGGATGAAAATCCGGCGAAACAATTTGATACA
TTGTTGTATTTAGCGTTTCAGCATCCTAAGTGTGAGAGGACTAATGCGAGGCACGTGAGG
TCGGGGCATTCAAGATTGGGTTTTTTAGGACAGTATGTTCTTGAATTGTGTTTGTGTGAG
TTTTTCTTGCAAAGGTATCCTAGGGAGTCGCCCGGTCCAATGAGGGAAAGGGTGTATGCT
TTGATTGGGAAAAGGTATCTGCCTAAGTGGATTAAAAATGCTAGCTTGCAGAATTTGATT
TTTCCATATGATGATATGGATAAGTTAAAGAGGCTCGATAGGGAACCGCCTGTCAAATCT
GTGTTCTGGGCTTTGTTTGGAGCAATATACTTGTGTTTTGGGATGCCTGAAGTTTATCGT
GTCCTATTTGAAGTGTGTGGAATGGATCCTGAGGCTGAAGATTGCCAGCCTAAATTGAGG
AGACAGTTGGAAGATGTAGACTATGTCTCTGTAGAATTTGAAGGGAGAAAGCTTAGTTGG
CAGGATGTTGCTTCTTATAAGCTTCCGGAGGATGCTCTTTTTGCACACCCAAGGGTTTTC
AGGGCATGTGTTCCACCAGGTATGCATAGGTTCCGTGGTAATGTATGGGATTATACCAGC
AGACCTCAAGTTATGCAGACATTGGGATACCCATTGGCAATGAATGATAGGATCCCTGAT
ATTACTGAAGCCAGAAATATTGAACTTGGACTTGGTTTACAGCTCTCTTTCTTGCACCCA
TCAAAATACAAGTTTGAGCATCCGAGGTTTTGCTATGAGCGGCTAGAATACCTTGGCCAA
AAAATTCAGGATTTGGTAATGGCGGAAAGGTTACTTATGAAGCATCTCGACGCTCCTGGG
AGATGGTTGCAAGAGAAACACCGACGTATCTTGATGAACAAATTCTGCGGGAGATATTTG
CGAGAAAAGAATCTCCATCGCTTGATCATTTATAGCGAAGAGGTTCAGGATGCATTCGAA
CATAACCGTAGGCTCAGAAATCCAGCTACAACTTCTGTTCAACAAGCTATTCATGGACTC
TCTTATGCTATATATGGGAAGCCGGATGTAAGACGCCTCATGTTTGAGGTTTTTGACTTT
GAACAGATCCAACCCAAGGTGGTATGA

Peptide Sequence

PEP ID

XP_016513398.1
PEP Infomation

PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic-like isoform X1 [Nicotiana tabacum]
Sequence

MAMELCSTFKPNSFDLSFSSSFSHFSLQTHVKSFKLAPKIHVLAVAVDPKELPQNSPQRL
LKELAERKKVVSPKRKVPPKRFILKPPLDDAKLAERFLNSPQLSLKSFPLLSSCLPCSRL
NNADKSWIDEYLLEVKQALGYPLEPSESFGDENPAKQFDTLLYLAFQHPKCERTNARHVR
SGHSRLGFLGQYVLELCLCEFFLQRYPRESPGPMRERVYALIGKRYLPKWIKNASLQNLI
FPYDDMDKLKRLDREPPVKSVFWALFGAIYLCFGMPEVYRVLFEVCGMDPEAEDCQPKLR
RQLEDVDYVSVEFEGRKLSWQDVASYKLPEDALFAHPRVFRACVPPGMHRFRGNVWDYTS
RPQVMQTLGYPLAMNDRIPDITEARNIELGLGLQLSFLHPSKYKFEHPRFCYERLEYLGQ
KIQDLVMAERLLMKHLDAPGRWLQEKHRRILMNKFCGRYLREKNLHRLIIYSEEVQDAFE
HNRRLRNPATTSVQQAIHGLSYAIYGKPDVRRLMFEVFDFEQIQPKVV

Transcript Sequence

Gene sequence data has not been registered.